PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KHN19045.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
Family bHLH
Protein Properties Length: 343aa    MW: 38792.2 Da    PI: 7.9902
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KHN19045.1genomeTCUHKView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH39.31.1e-12166213355
                 HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
         HLH   3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                 + h ++Er+RR+++ ++f  L  l+P +     kK++Ka++L +A++Y+k++q
  KHN19045.1 166 QDHIIAERKRREKLSQRFIALSALVPGL-----KKMDKASVLGEAIKYLKQMQ 213
                 5799************************.....9*****************99 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088816.018163212IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474591.44E-16167227IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000102.9E-10167213IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.102.5E-17167225IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000831.00E-11168217No hitNo description
SMARTSM003534.1E-14169218IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 343 aa     Download sequence    Send to blast
MEISSIRGLP EMGIIEDPNF LHHWQLNSID TTSLTGAPFG EILQKHSFSD NSNFNPKTSM  60
ETSPTGIERP AKQLRNNSWN HNKSQQQTPE TQFASCSNLL SFVNSNYTSE LGLVKPKVEM  120
VCPKINNNTL ADMLISQGNL GNQNYLFKAS QEAKKIETRP KLSQPQDHII AERKRREKLS  180
QRFIALSALV PGLKKMDKAS VLGEAIKYLK QMQEKVSALE EEQNRKRTVE SVVIVKKSRL  240
SSDAEDSSSS ETGDTFDEAL PEIEARFYER NVLIRIHCEK NKGVIEKTIS EIEKLHLKVI  300
NSSALTFGSF ILDITIIAQM DMEFCMTVKD LVRSLRSAFS YFV
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1171176ERKRRE
2172177RKRREK
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAF0697380.0AF069738.1 Glycine max symbiotic ammonium transporter (SAT1) mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_006594659.10.0PREDICTED: transcription factor bHLH25-like isoform X2
SwissprotQ9T0729e-63BH025_ARATH; Transcription factor bHLH25
TrEMBLA0A0B2QCN00.0A0A0B2QCN0_GLYSO; Transcription factor bHLH25
TrEMBLI1M2J00.0I1M2J0_SOYBN; Uncharacterized protein
STRINGGLYMA13G32650.10.0(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF45534164
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G37850.13e-61bHLH family protein
Publications ? help Back to Top
  1. Qi X, et al.
    Identification of a novel salt tolerance gene in wild soybean by whole-genome sequencing.
    Nat Commun, 2014. 5: p. 4340
    [PMID:25004933]